teal - Exploratory Web Apps for Analyzing Clinical Trials Data

A 'shiny' based interactive exploration framework for analyzing clinical trials data. 'teal' currently provides a dynamic filtering facility and different data viewers. 'teal' 'shiny' applications are built using standard 'shiny' modules.

Last updated 9 months ago

clinical-trialsnestshinywebapp

11.99 score 181 stars 5 packages 142 scripts 427 downloads

teal.data - Data Model for 'teal' Applications

Provides a 'teal_data' class as a unified data model for 'teal' applications focusing on reproducibility and relational data.

Last updated 7 months ago

data-modelnest

9.75 score 9 stars 8 packages 42 scripts 739 downloads

teal.slice - Filter Module for 'teal' Applications

Data filtering module for 'teal' applications. Allows for interactive filtering of data stored in 'data.frame' and 'MultiAssayExperiment' objects. Also displays filtered and unfiltered observation counts.

Last updated 7 months ago

modulesnestslice

9.05 score 11 stars 6 packages 3 scripts 770 downloads

runner - Running Operations for Vectors

Lightweight library for rolling windows operations. Package enables full control over the window length, window lag and a time indices. With a runner one can apply any R function on a rolling windows. The package eases work with equally and unequally spaced time series.

Last updated 9 months ago

8.99 score 50 stars 4 packages 189 scripts 1.9k downloads

teal.modules.general - General Modules for 'teal' Applications

Prebuilt 'shiny' modules containing tools for viewing data, visualizing data, understanding missing and outlier values within your data and performing simple data analysis. This extends 'teal' framework that supports reproducible research and analysis.

Last updated 9 months ago

general-purposemodulesnestshiny

8.94 score 9 stars 57 scripts 201 downloads

teal.reporter - Reporting Tools for 'shiny' Modules

Prebuilt 'shiny' modules containing tools for the generation of 'rmarkdown' reports, supporting reproducible research and analysis.

Last updated 8 months ago

nestreportingshiny

8.93 score 8 stars 6 packages 19 scripts 473 downloads

teal.widgets - 'shiny' Widgets for 'teal' Applications

Collection of 'shiny' widgets to support 'teal' applications. Enables the manipulation of application layout and plot or table settings.

Last updated 11 months ago

nestshinywidgets

8.62 score 5 stars 8 packages 33 scripts 459 downloads

teal.code - Code Storage and Execution Class for 'teal' Applications

Introduction of 'qenv' S4 class, that facilitates code execution and reproducibility in 'teal' applications.

Last updated 11 months ago

nestshiny

8.61 score 11 stars 9 packages 11 scripts 379 downloads

teal.logger - Logging Setup for the 'teal' Family of Packages

Utilizing the 'logger' framework to record events within a package, specific to 'teal' family of packages. Supports logging namespaces, hierarchical logging, various log destinations, vectorization, and more.

Last updated 28 days ago

loggingnestutilities

8.06 score 4 stars 8 packages 4 scripts 397 downloads

teal.transform - Functions for Extracting and Merging Data in the 'teal' Framework

A standardized user interface for column selection, that facilitates dataset merging in 'teal' framework.

Last updated 9 months ago

mergemodulesnesttransform

8.02 score 3 stars 4 packages 9 scripts 324 downloads

sport - Sequential Pairwise Online Rating Techniques

Calculates ratings for two-player or multi-player challenges. Methods included in package such as are able to estimate ratings (players strengths) and their evolution in time, also able to predict output of challenge. Algorithms are based on Bayesian Approximation Method, and they don't involve any matrix inversions nor likelihood estimation. Parameters are updated sequentially, and computation doesn't require any additional RAM to make estimation feasible. Additionally, base of the package is written in C++ what makes sport computation even faster. Methods used in the package refers to Mark E. Glickman (1999) <http://www.glicko.net/research/glicko.pdf>; Mark E. Glickman (2001) <doi:10.1080/02664760120059219>; Ruby C. Weng, Chih-Jen Lin (2011) <http://jmlr.csail.mit.edu/papers/volume12/weng11a/weng11a.pdf>; W. Penny, Stephen J. Roberts (1999) <doi:10.1109/IJCNN.1999.832603>.

Last updated 5 years ago

5.76 score 24 stars 24 scripts 236 downloads

ox - Shorthand if-Else

Short hand if-else function to easily switch the values depending on a logical condition.

Last updated 3 years ago

4.30 score 4 stars 6 scripts 164 downloads